| 1 | Vainikk Annika | 2000 | EST Spordiklubi Garant | 01'00''16 | 635 |  |  | |
50m 28.66 (28.66) 100m 1:00.16 (31.50) [1:00.16] |
| 2 | Kaare Kertu | 2002 | EST Kalevi Ujumiskool | 01'00''22 | 633 | | | |
50m 28.61 (28.61) 100m 1:00.22 (31.61) [1:00.22] |
| 3 | Maas Mari Liis | 2004 | EST Topi Ujumisklubi | 01'01''50 | 594 | | | |
50m 29.76 (29.76) 100m 1:01.50 (31.74) [1:01.50] |
| 4 | Haljaste Heleriin | 2007 | EST Ujumise Spordiklubi | 01'02''62 | 563 | | | |
50m 29.67 (29.67) 100m 1:02.62 (32.95) [1:02.62] |
| 5 | Vark Freia | 2006 | EST Audentese Sk | 01'04''10 | 524 | | | |
50m 30.11 (30.11) 100m 1:04.10 (33.99) [1:04.10] |
| 6 | Larikova Katalina | 2006 | EST Sillamae Ujumisklubi Kalev | 01'04''52 | 514 | | | |
50m 30.93 (30.93) 100m 1:04.52 (33.59) [1:04.52] |
| 7 | Nagel Mirtel | 2007 | EST Kalevi Ujumiskool | 01'04''69 | 510 | | | |
50m 30.85 (30.85) 100m 1:04.69 (33.84) [1:04.69] |
| 8 | Raidmaee Margaret | 2007 | EST Tuk | 01'04''87 | 506 | | | |
50m 30.42 (30.42) 100m 1:04.87 (34.45) [1:04.87] |
| 9 | Jurioo Elisabet | 2005 | EST Jarveotsa Spordiklubi | 01'06''91 | 461 | | | |
50m 31.97 (31.97) 100m 1:06.91 (34.94) [1:06.91] |
| 10 | Punt Gretel | 2005 | EST Kristjan Palusalu Spordiklubi | 01'07''15 | 456 | | | |
50m 32.37 (32.37) 100m 1:07.15 (34.78) [1:07.15] |
| 11 | Sillamaa Mirjette | 2006 | EST Audentese Sk | 01'07''93 | 441 | | | |
50m 32.55 (32.55) 100m 1:07.93 (35.38) [1:07.93] |
| 12 | Mardi Martina | 2005 | EST Myfitness | 01'08''35 | 433 | | | |
50m 32.40 (32.40) 100m 1:08.35 (35.95) [1:08.35] |
| 13 | Lauri Johanna | 2006 | EST Bird Cherry | 01'08''91 | 422 | | | |
50m 32.19 (32.19) 100m 1:08.91 (36.72) [1:08.91] |
| 14 | Maekivi Triin | 2007 | EST Kalevi Ujumiskool | 01'10''44 | 395 | | | |
50m 32.88 (32.88) 100m 1:10.44 (37.56) [1:10.44] |
| 15 | Krylova Jana | 2007 | EST Sillamae Ujumisklubi Kalev | 01'11''05 | 385 |
| 16 | Tahve Heidi | 2007 | EST Jarveotsa Spordiklubi | 01'11''62 | 376 | | | |
50m 34.32 (34.32) 100m 1:11.62 (37.30) [1:11.62] |
| 17 | Volkov Linda | 2007 | EST Ujumisklubi Briis | 01'11''76 | 374 | | | |
50m 33.47 (33.47) 100m 1:11.76 (38.29) [1:11.76] |
| 18 | Akkermann Marleen | 2006 | EST Kalevi Ujumiskool | 01'14''05 | 340 | | | |
50m 34.67 (34.67) 100m 1:14.05 (39.38) [1:14.05] |
| 19 | Bezko Liina | 2006 | EST Kohtla-Jarve Spordiselts Kalev | 01'15''40 | 322 | | | |
50m 35.33 (35.33) 100m 1:15.40 (40.07) [1:15.40] |
