| 1 | Jurisoo Miriam | 2008 | EST Topi Ujumisklubi | 01'04''60 | 613 |  |  | |
50m 31.11 (31.11) 100m 1:04.60 (33.49) [1:04.60] |
| 2 | Jaarats Emily Parli | 2011 | EST Audentese Sk | 01'06''52 | 561 | | | |
50m 32.09 (32.09) 100m 1:06.52 (34.43) [1:06.52] |
| 3 | Roos Aleksandra | 2010 | EST Parnu Spordikool | 01'07''69 | 533 | | | |
50m 34.59 (34.59) 100m 1:07.69 (33.10) [1:07.69] |
| 4 | Pruunlep Lenna Marii | 2010 | EST Orca Swim Club | 01'10''75 | 466 | | | |
50m 34.22 (34.22) 100m 1:10.75 (36.53) [1:10.75] |
| 5 | Rahumagi Nora | 2009 | EST Viimsi Veeklubi/Bruno Ujumiskool | 01'11''86 | 445 | | | |
50m 34.64 (34.64) 100m 1:11.86 (37.22) [1:11.86] |
| 6 | Suuroja Charlotte Sophia | 2010 | EST Audentese Sk | 01'12''85 | 427 | | | |
50m 35.24 (35.24) 100m 1:12.85 (37.61) [1:12.85] |
| 7 | Maesepp Rosanna | 2010 | EST Topi Ujumisklubi | 01'13''54 | 415 | | | |
50m 35.44 (35.44) 100m 1:13.54 (38.10) [1:13.54] |
| 8 | Miller Sandra | 2008 | EST Ujumisklubi Briis | 01'16''65 | 367 | | | |
50m 36.34 (36.34) 100m 1:16.65 (40.31) [1:16.65] |
| 9 | Viinapuu Karola | 2009 | EST Audentese Sk | 01'17''26 | 358 | | | |
50m 37.32 (37.32) 100m 1:17.26 (39.94) [1:17.26] |
| 10 | Paidre Sofia | 2011 | EST Audentese Sk | 01'19''01 | 335 | | | |
50m 37.78 (37.78) 100m 1:19.01 (41.23) [1:19.01] |
| 11 | Karro Julia | 2008 | EST Argo Ujumisklubi | 01'19''19 | 333 | | | |
50m 37.98 (37.98) 100m 1:19.19 (41.21) [1:19.19] |
| 12 | Randla Kertu Krete | 2010 | EST Ujumisklubi Briis | 01'21''42 | 306 | | | |
50m 39.13 (39.13) 100m 1:21.42 (42.29) [1:21.42] |
