| 1 | Lankova Katerina | 2003 | CZE SC Plavecky Areal Pardubice | 01'12''48 | 692 |  |  | |
50m 34.31 (34.31) 100m 1:12.48 (38.17) [1:12.48] |
| 2 | Vadovicova Nina | 2003 | SVK Stu Trnava | 01'13''85 | 654 | | | |
50m 34.49 (34.49) 100m 1:13.85 (39.36) [1:13.85] |
| 3 | Zaborska Miroslava | 2001 | SVK Stu Trnava | 01'14''56 | 636 | | | |
50m 36.03 (36.03) 100m 1:14.56 (38.53) [1:14.56] |
| 4 | Binar Mimovicova Zuzana | 1989 | SVK Sport Club Of Police - Swimming Kosice | 01'15''53 | 612 | | | |
50m 36.50 (36.50) 100m 1:15.53 (39.03) [1:15.53] |
| 5 | Gogelova Michaela | 2001 | CZE Plavecky Klub Zlin | 01'17''70 | 562 | | | |
50m 36.41 (36.41) 100m 1:17.70 (41.29) [1:17.70] |
| 6 | Matusova Ema | 2003 | SVK Stu Trnava | 01'18''56 | 543 | | | |
50m 36.49 (36.49) 100m 1:18.56 (42.07) [1:18.56] |
| 7 | Nikolajova Sara | 2003 | SVK Xbs Swimming | 01'18''65 | 542 | | | |
50m 36.69 (36.69) 100m 1:18.65 (41.96) [1:18.65] |
| 8 | Lengyelova Barbora | 2003 | SVK Stu Trnava | 01'18''91 | 536 | | | |
50m 37.11 (37.11) 100m 1:18.91 (41.80) [1:18.91] |
| 9 | Melnicakova Lenka | 2003 | SVK Sport Club Of Police - Swimming Kosice | 01'19''51 | 524 | | | |
50m 36.23 (36.23) 100m 1:19.51 (43.28) [1:19.51] |
| 10 | Schlosserova Lucie | 2001 | CZE Plavecky Klub Zlin | 01'19''75 | 519 | | | |
50m 37.53 (37.53) 100m 1:19.75 (42.22) [1:19.75] |
| 11 | Reindl Robin | 2002 | SVK SK Aquasport Levice | 01'20''53 | 505 | | | |
50m 37.69 (37.69) 100m 1:20.53 (42.84) [1:20.53] |
| 12 | Stangova Ema | 2003 | SVK Stu Trnava | 01'20''67 | 502 | | | |
50m 37.76 (37.76) 100m 1:20.67 (42.91) [1:20.67] |
| 13 | Bartovicova Barbara | 1998 | SVK Stu Trnava | 01'21''94 | 479 | | | |
50m 38.97 (38.97) 100m 1:21.94 (42.97) [1:21.94] |
| 14 | Jancalkova Lucie | 2003 | CZE Sportovni Klub Koprivnice | 01'22''05 | 477 | | | |
50m 37.11 (37.11) 100m 1:22.05 (44.94) [1:22.05] |
| 15 | Michalcikova Stepanka | 2003 | CZE Plavecky Klub Zlin | 01'22''31 | 472 | | | |
50m 38.95 (38.95) 100m 1:22.31 (43.36) [1:22.31] |
| 16 | Seidlova Alica | 2003 | SVK Klub Plaveckych Sportov Nereus Zilina | 01'23''45 | 453 | | | |
50m 38.56 (38.56) 100m 1:23.45 (44.89) [1:23.45] |
| 17 | Hablova Kristyna | 2002 | CZE Plavecky Klub Zlin | 01'24''04 | 444 |
| 18 | Polerecka Emma | 2001 | SVK Plavecky Klub Sportove Gymnazium Nitra | 01'26''29 | 410 |
| 19 | Vlckova Hana | 1998 | CZE Vysokoskolsky Sportovni Klub Univerzita Brno | 01'28''35 | 382 | | | |
50m 41.32 (41.32) 100m 1:28.35 (47.03) [1:28.35] |
| 20 | Sivicekova Stanislava | 2001 | SVK Plavecky Klub Sportove Gymnazium Nitra | 01'29''50 | 367 | | | |
50m 42.10 (42.10) 100m 1:29.50 (47.40) [1:29.50] |
| 21 | Heksova Dominika | 2003 | SVK Royal Plavecky Klub | 01'29''64 | 366 | | | |
50m 40.99 (40.99) 100m 1:29.64 (48.65) [1:29.64] |
