| 1 | Karacic Dominik | 2000 | CRO PK Mladost Zagreb | 00'55''29 | 672 |
| 2 | Filipovic Ivan | 1999 | CRO Pk Osijek-Zito | 00'56''16 | 641 |
| 3 | Caleta Jerko | 2000 | CRO Sisak | 00'56''44 | 632 |
| 4 | Umnov Michael | 1997 | MLT Malta | 00'56''56 | 628 |
| 5 | Custic David | 1997 | CRO Rijeka | 00'56''57 | 627 |
| 6 | Rozman Matjaz | 1999 | SLO Plavalni Klub Olimpija Ljubljana | 00'56''94 | 615 |
| 7 | Petrovski Davor | 2000 | MKD Plivacki Klub Beta Shark Skopje | 00'57''30 | 604 |
| 8 | Vukicevic Robert | 2002 | CRO Sisak | 00'57''33 | 603 |
| 9 | Pusic Ivan | 2002 | CRO PK Mladost Zagreb | 00'58''19 | 576 |
| 10 | Tafra Nikola | 2000 | CRO Jadran Split | 00'58''41 | 570 |
| 11 | Brassard Michel | 2002 | CRO Jug - Dubrovnik | 00'58''53 | 566 |
| 12 | Valincic Marin | 1999 | CRO Pk Osijek-Zito | 00'58''61 | 564 |
| 13 | Hrzenjak Martin | 1999 | CRO Plivacki Klub Pula | 00'58''72 | 561 |
| 14 | Lakovic Anteo | 2000 | CRO Plivacki Klub Pula | 00'58''95 | 554 |
| 15 | Knezevic Dino | 1998 | CRO Medvescak Zagreb | 00'59''76 | 532 |
| 16 | Martinic Matija | 2001 | CRO Zagrebacki Plivacki Klub - Zagreb | 00'59''85 | 530 |
| 17 | Medica Adrian | 2000 | CRO Rijeka | 00'59''89 | 529 |
| 18 | Richter Roman | 1988 | CRO Croatia | 01'00''06 | 524 |
| 19 | Silov Patrik | 2000 | CRO Dubrava Zagreb | 01'00''30 | 518 |
| 20 | Rukavina Dario | 2003 | CRO PK Mladost Zagreb | 01'00''35 | 517 |
| 21 | Hunic Marko | 2001 | CRO Dubrava Zagreb | 01'00''41 | 515 |
| 22 | Grgic Duje | 2001 | CRO Jadera Zadar | 01'00''79 | 505 |
| 23 | Karlic Antonio | 2001 | CRO Swim Club Kantrida | 01'00''86 | 504 |
| 24 | Omicevic Adrian | 1995 | CRO Zagrebacki Plivacki Klub - Zagreb | 01'01''09 | 498 |
| 25 | Habazin Dominik | 2002 | CRO Zagrebacki Plivacki Klub - Zagreb | 01'01''12 | 497 |
| 26 | Radovic Marko | 2001 | CRO Zadar | 01'01''13 | 497 |
| 27 | Strbac Dorjan | 2002 | CRO PK Mladost Zagreb | 01'01''24 | 494 |
| 28 | Vrbic Val | 2001 | CRO PK Mladost Zagreb | 01'01''54 | 487 |
| 29 | Podbevsek Janez | 2002 | SLO Plavalni Klub Ljubljana | 01'01''91 | 478 |
| 30 | Kappler Louis | 2002 | CRO PK Mladost Zagreb | 01'02''10 | 474 |
| 31 | Ovnicevic Filip | 2002 | CRO Pk Osijek-Zito | 01'02''11 | 474 |
| 32 | Puhalovic Bozo | 2002 | CRO Zadar | 01'02''17 | 473 |
| 33 | Predalic Gregor | 2002 | SLO Plavalni Klub Ljubljana | 01'02''80 | 458 |
| 34 | Budak Josip | 2001 | CRO Zadar | 01'02''85 | 457 |
| 35 | Cigic Filip | 2003 | CRO PK Mladost Zagreb | 01'03''04 | 453 |
| 36 | Rakijasic Jan | 2003 | CRO Vinkovacki Plivacki Klub | 01'03''06 | 453 |
| 37 | Vincetic Kristijan | 1991 | CRO Dubrava Zagreb | 01'03''35 | 447 |
| 38 | Balen Lovro | 2002 | CRO PK Mladost Zagreb | 01'03''64 | 440 |
| 39 | Vezmarovic Ilan | 2001 | CRO Sisak | 01'03''67 | 440 |
| 40 | Olah Lovro | 2001 | CRO Sisak | 01'04''06 | 432 |
| 41 | Miota Mark | 2003 | CRO Plivacki Klub Pula | 01'04''18 | 429 |
| 42 | Vondra Bruno Rok | 2003 | CRO Dubrava Zagreb | 01'05''44 | 405 |
| 43 | Markic Bruno | 2002 | CRO Dubrava Zagreb | 01'05''49 | 404 |
| 44 | Ramljak Patrick | 2003 | CRO PK Mladost Zagreb | 01'06''12 | 393 |
| 45 | Ormuz Paolo | 2002 | CRO Medvescak Zagreb | 01'06''80 | 381 |
| 46 | Matovic Divo | 2000 | CRO Jug - Dubrovnik | 01'07''53 | 369 |
| 47 | Zgomba Antonio | 2000 | CRO Plivacki Klub Pula | 01'07''77 | 365 |
| 48 | Damic Divo | 2002 | CRO Jug - Dubrovnik | 01'08''25 | 357 |
| 49 | Aleksic Elvis | 2001 | CRO Plivacki Klub Pula | 01'08''72 | 350 |
| 50 | Vujic Goran | 2003 | CRO Sisak | 01'10''53 | 323 |
| 51 | Aralica Jakov | 2002 | CRO Dubrava Zagreb | 01'11''85 | 306 |
| 52 | Dulic Rijad | 2002 | BIH Sport Time - Sarajevo | 01'16''33 | 255 |
| 53 | Markovic Karlo | 2003 | CRO Igra Zagreb | 01'17''00 | 248 |
| FG | Herak Manuel | 2004 | CRO Delfin | 01'09''31 | 341 |
